Never been to CodeSnippets before?

Snippets is a public source code repository. Easily build up your personal collection of code snippets, categorize them with tags / keywords, and share them with the world (or not, you can keep them private!)

Install postgres gem on Mac OS X 10.5 (Leopard)

When upgrading or installing recent versions of the postgres ruby gem on Leopard the following error appears

	===========   WARNING   ===========

		You are building this extension on OS X without setting the
		ARCHFLAGS environment variable, and PostgreSQL does not appear
		to have been built as a universal binary. If you are seeing this
		message, that means that the build will probably fail.

		Try setting the environment variable ARCHFLAGS
		to '-arch i386' before building.

		For example:
		(in bash) $ export ARCHFLAGS='-arch i386'
		(in tcsh) $ setenv ARCHFLAGS '-arch i386'

		Then try building again.

		===================================


The trick is to set the ARCHFLAGS variable inside the sudo command using env.

sudo env ARCHFLAGS="-arch i386" gem install postgres

Postgresql dump SS archive script

Dump, bzip, and upload a postgres database to strongspace. Via Ubernostrum

#!/usr/bin/bash

FILENAME=b_list-`/usr/xpg4/bin/date +%Y%m%d`.sql.bz2
cd /home/myuser/dumps
/opt/local/bin/pg_dump -U db_username db_name | /usr/bin/bzip2 > $FILENAME
/usr/bin/scp $FILENAME me@strongspace:/my/backup/dir/

Install RdbiPgSQL package for R on OS X

Connecting R to Postgres on OS X is a little bit of a hassle given where OS X looks for the libraries to link to.

Assuming you've installed Postgres via MacPorts, then install Rdbi as you would normally.

source("http://bioconductor.org/biocLite.R")
biocLite("Rdbi")


Then grab the RdbiPgSQL package source:

cd /tmp
curl -O http://bioconductor.org/packages/2.5/bioc/src/contrib/RdbiPgSQL_1.20.0.tar.gz


Pass in the location of your Postgres libraries and include files to the INSTALL command using --config-args

sudo R CMD INSTALL --configure-args='--with-pgsql-libraries=/opt/local/lib/postgresql84 --with-pgsql-includes=/opt/local/include/postgresql84' RdbiPgSQL_1.20.0.tar.gz




load/unload postgres (via ports) launch deamon

Enable or disable the automatic launch of the postgresql server installed via macports. Starts or stops the daemon and modifies the launchd manifest.

launchctl load -w /opt/local/etc/LaunchDaemons/org.darwinports.postgresql81-server/org.darwinports.postgresql81-server.plist

launchctl unload -w /opt/local/etc/LaunchDaemons/org.darwinports.postgresql81-server/org.darwinports.postgresql81-server.plist

start postgres

Postgres was installed through darwinports, so

/opt/local/lib/postgresql81/bin/pg_ctl -D /opt/local/var/db/postgresql81/defaultdb/ start